Functional profiling and gene expression analysis of chromosomal copy number alterations. Submitted by iguillen on Thu, 07/04/2019 - 12:48 Conde L, Montaner D, Burguet-Castell J, Tárraga J, Al-Shahrour F, Dopazo J. Functional profiling and gene expression analysis of chromosomal copy number alterations. Bioinformation. 2007;1(10):432-5. doi:10.6026/97320630001432.
From genes to functional classes in the study of biological systems. Submitted by iguillen on Thu, 07/04/2019 - 12:47 Al-Shahrour F, Arbiza L, Dopazo H, et al. From genes to functional classes in the study of biological systems. BMC Bioinformatics. 2007;8:114. doi:10.1186/1471-2105-8-114.
FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments. Submitted by iguillen on Thu, 07/04/2019 - 12:46 Al-Shahrour F, Minguez P, Tárraga J, et al. FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments. Nucleic Acids Res. 2007;35(Web Server issue):W91-6. doi:10.1093/nar/gkm260.
Evidence for systems-level molecular mechanisms of tumorigenesis. Submitted by iguillen on Thu, 07/04/2019 - 12:45 Hernández P, Huerta-Cepas J, Montaner D, et al. Evidence for systems-level molecular mechanisms of tumorigenesis. BMC Genomics. 2007;8:185. doi:10.1186/1471-2164-8-185.
DBAli tools: mining the protein structure space. Submitted by iguillen on Thu, 07/04/2019 - 12:43 Marti-Renom MA, Pieper U, Madhusudhan MS, et al. DBAli tools: mining the protein structure space. Nucleic Acids Res. 2007;35(Web Server issue):W393-7. doi:10.1093/nar/gkm236.
Use of estimated evolutionary strength at the codon level improves the prediction of disease-related protein mutations in humans. Submitted by iguillen on Thu, 07/04/2019 - 12:40 Capriotti E, Arbiza L, Casadio R, Dopazo J, Dopazo H, Marti-Renom MA. Use of estimated evolutionary strength at the codon level improves the prediction of disease-related protein mutations in humans. Hum Mutat. 2008;29(1):198-204. doi:10.1002/humu.20628.
SNP and haplotype mapping for genetic analysis in the rat. Submitted by iguillen on Thu, 07/04/2019 - 12:39 Saar K, Beck A, Bihoreau M-T, et al. SNP and haplotype mapping for genetic analysis in the rat. Nat Genet. 2008;40(5):560-6. doi:10.1038/ng.124.
PhylomeDB: a database for genome-wide collections of gene phylogenies. Submitted by iguillen on Thu, 07/04/2019 - 12:38 Huerta-Cepas J, Bueno A, Dopazo J, Gabaldón T. PhylomeDB: a database for genome-wide collections of gene phylogenies. Nucleic Acids Res. 2008;36(Database issue):D491-6. doi:10.1093/nar/gkm899.
Molecular profiling related to poor prognosis in thyroid carcinoma. Combining gene expression data and biological information. Submitted by iguillen on Thu, 07/04/2019 - 11:55 Montero-Conde C, Martín-Campos JM, Lerma E, et al. Molecular profiling related to poor prognosis in thyroid carcinoma. Combining gene expression data and biological information. Oncogene. 2008;27(11):1554-61. doi:10.1038/sj.onc.1210792.
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases. Submitted by iguillen on Thu, 07/04/2019 - 11:54 Reumers J, Conde L, Medina I, et al. Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases. Nucleic Acids Res. 2008;36(Database issue):D825-9. doi:10.1093/nar/gkm979.
