01742nas a2200217   4500008004100000245007200041210006900113300001000182490000700192520087900199653006301078653004601141653012601187100001801313700001501331700001901346700002401365700001601389700001301405856010601418       2003                        eng d00aModView, visualization of multiple protein sequences and structures0 aModView visualization of multiple protein sequences and structur  a165-60 v193 aSUMMARY: We describe ModView, a web application for visualization of multiple protein sequences and structures. ModView integrates a multiple structure viewer, a multiple sequence alignment editor, and a database querying engine. It is possible to interactively manipulate hundreds of proteins, to visualize conservative and variable residues, active and binding sites, fragments, and domains in protein families, as well as to display large macromolecular complexes such as ribosomes or viruses. As a Netscape plug-in, ModView can be included in HTML pages along with text and figures, which makes it useful for teaching and presentations. ModView is also suitable as a graphical interface to various databases because it can be controlled through JavaScript commands and called from CGI scripts. AVAILABILITY: ModView is available at http://guitar.rockefeller.edu/modview.10a*Database Management Systems Documentation/methods Imaging10aProtein/*methods *User-Computer Interface10aThree-Dimensional/methods Protein Conformation Proteins/*chemistry/genetics Sequence Alignment/*methods Sequence Analysis1 aIlyin, V., A.1 aPieper, U.1 aStuart, A., C.1 aMarti-Renom, M., A.1 aMcMahan, L.1 aSali, A.  uhttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=12499313